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Adam M. Phillippy

National Human Genome Research Institute US

ORCID iD 0000-0003-2983-8934
335
Publications
77,331
Citations
94
H-Index
203
i10-Index
22.67
2yr Mean Cite
-
Cite/Paper
Data combined from OpenAlex . OA = OpenAlex S2 = Semantic Scholar
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Publication & Citation Trends

Most Cited Works

Canu: scalable and accurate long-read assembly via adaptive <i>k</i> -mer weighting and repeat separation OA
Sergey Koren, Brian P. Walenz, Konstantin Berlin, Jason Miller, Nicholas H. Bergman +1 more
Genome Research 2017
8,075
Versatile and open software for comparing large genomes OA
Stefan Kurtz, Adam M. Phillippy, Arthur L. Delcher, Michael Smoot, Martin Shumway +2 more
Genome biology 2004
5,809
High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries OA
Chirag Jain, Luis M. Rodriguez‐R, Adam M. Phillippy, Konstantinos T. Konstantinidis, Srinivas Aluru
Nature Communications 2018
5,458
Mash: fast genome and metagenome distance estimation using MinHash OA
Brian Ondov, Todd J. Treangen, Páll Melsted, Adam B. Mallonee, Nicholas H. Bergman +2 more
Genome biology 2016
3,477
Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies OA
Arang Rhie, Brian P. Walenz, Sergey Koren, Adam M. Phillippy
Genome biology 2020
3,327

Publications

326 total

The complete sequence of a human genome PDF

Sergey Nurk, Sergey Koren, Arang Rhie, Mikko Rautiainen, Andrey V. Bzikadze et al. - Science, 2022
Cited by 3,224 OpenAlex

Merqury: reference-free quality, completeness, and phasing assessment for genome assemblies PDF

Arang Rhie, Brian P. Walenz, Sergey Koren, Adam M. Phillippy - Genome biology, 2020
Cited by 3,327 OpenAlex

<i>De novo</i> assembly of the cattle reference genome with single-molecule sequencing PDF

Benjamin D. Rosen, Derek M. Bickhart, Robert D. Schnabel, Sergey Koren, Christine G. Elsik et al. - GigaScience, 2020
Cited by 898 OpenAlex

Accurate circular consensus long-read sequencing improves variant detection and assembly of a human genome PDF

Aaron M. Wenger, Paul Peluso, William J. Rowell, Pi-Chuan Chang, Richard Hall et al. - Nature Biotechnology, 2019
Cited by 1,902 OpenAlex

High throughput ANI analysis of 90K prokaryotic genomes reveals clear species boundaries PDF

Chirag Jain, Luis M. Rodriguez‐R, Adam M. Phillippy, Konstantinos T. Konstantinidis, Srinivas Aluru - Nature Communications, 2018
Cited by 5,458 OpenAlex

MUMmer4: A fast and versatile genome alignment system PDF

Guillaume Marçais, Arthur L. Delcher, Adam M. Phillippy, Rachel Coston, Steven L. Salzberg et al. - PLoS Computational Biology, 2018
Cited by 2,697 OpenAlex

Nanopore sequencing and assembly of a human genome with ultra-long reads PDF

Miten Jain, Sergey Koren, Karen H. Miga, Josh Quick, Arthur C Rand et al. - Nature Biotechnology, 2018
Cited by 2,075 OpenAlex

Canu: scalable and accurate long-read assembly via adaptive <i>k</i> -mer weighting and repeat separation PDF

Sergey Koren, Brian P. Walenz, Konstantin Berlin, Jason Miller, Nicholas H. Bergman et al. - Genome Research, 2017
Cited by 8,075 OpenAlex

Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly PDF

Valérie Schneider, Tina A. Graves-Lindsay, Kerstin Howe, Nathan Bouk, Hsiu-Chuan Chen et al. - Genome Research, 2017
Cited by 1,261 OpenAlex

Mash: fast genome and metagenome distance estimation using MinHash PDF

Brian Ondov, Todd J. Treangen, Páll Melsted, Adam B. Mallonee, Nicholas H. Bergman et al. - Genome biology, 2016
Cited by 3,477 OpenAlex

Research Topics

Genomics and Phylogenetic Studies (175) Chromosomal and Genetic Variations (113) RNA and protein synthesis mechanisms (40) Bacteriophages and microbial interactions (34) CRISPR and Genetic Engineering (31)

Frequent Co-Authors

SE
Sergey Koren
11 joint publications
BR
Brian P. Walenz
4 joint publications
AR
Arang Rhie
4 joint publications
CH
Chen-Shan Chin
4 joint publications
NI
Nicholas H. Bergman
3 joint publications
ST
Steven L. Salzberg
3 joint publications

Affiliations

Broad Institute
US 2007 - 2007
Human Genome Sciences (United States)
US 2003 - 2003
Stowers Institute for Medical Research
US 2024 - 2024
University of Maryland, Baltimore
US 2011 - 2005
National Institutes of Health
US 2025 - 2015

External Profiles

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