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Rommie E. Amaro

University of California San Diego US

ORCID iD 0000-0002-9275-9553
425
Publications
14,642
Citations
63
H-Index
186
i10-Index
4.11
2yr Mean Cite
-
Cite/Paper
Data combined from OpenAlex . OA = OpenAlex S2 = Semantic Scholar
Verify on Google Scholar

Publication & Citation Trends

Most Cited Works

Beyond Shielding: The Roles of Glycans in the SARS-CoV-2 Spike Protein OA
Lorenzo Casalino, Zied Gaieb, Jory A. Goldsmith, Christy K. Hjorth, Abigail C. Dommer +7 more
ACS Central Science 2020
1,062
Ensemble Docking in Drug Discovery OA
Rommie E. Amaro, Jérôme Baudry, John D. Chodera, Özlem Demir, J. Andrew McCammon +2 more
Biophysical Journal 2018
483
A glycan gate controls opening of the SARS-CoV-2 spike protein OA
Terra Sztain, Surl-Hee Ahn, Anthony T. Bogetti, Lorenzo Casalino, Jory A. Goldsmith +12 more
Nature Chemistry 2021
405
SARS-CoV-2 escape from a highly neutralizing COVID-19 convalescent plasma OA
Emanuele Andreano, Giulia Piccini, Danilo Licastro, Lorenzo Casalino, Nicole V. Johnson +13 more
Proceedings of the National Academy of Sciences 2021
376
An improved relaxed complex scheme for receptor flexibility in computer-aided drug design OA
Rommie E. Amaro, Riccardo Baron, J. Andrew McCammon
Journal of Computer-Aided Molecular Design 2008
324

Publications

425 total

A glycan gate controls opening of the SARS-CoV-2 spike protein PDF

Terra Sztain, Surl-Hee Ahn, Anthony T. Bogetti, Lorenzo Casalino, Jory A. Goldsmith et al. - Nature Chemistry, 2021
Cited by 405 OpenAlex

SARS-CoV-2 escape from a highly neutralizing COVID-19 convalescent plasma PDF

Emanuele Andreano, Giulia Piccini, Danilo Licastro, Lorenzo Casalino, Nicole V. Johnson et al. - Proceedings of the National Academy of Sciences, 2021
Cited by 376 OpenAlex

A critical overview of computational approaches employed for COVID-19 drug discovery PDF

Eugene Muratov, Rommie E. Amaro, Carolina Horta Andrade, Nathan Brown, Sean Ekins et al. - Chemical Society Reviews, 2021
Cited by 206 OpenAlex

Beyond Shielding: The Roles of Glycans in the SARS-CoV-2 Spike Protein PDF

Lorenzo Casalino, Zied Gaieb, Jory A. Goldsmith, Christy K. Hjorth, Abigail C. Dommer et al. - ACS Central Science, 2020
Cited by 1,062 OpenAlex

SARS-CoV-2 escape <i>in vitro</i> from a highly neutralizing COVID-19 convalescent plasma PDF

Emanuele Andreano, Giulia Piccini, Danilo Licastro, Lorenzo Casalino, Nicole V. Johnson et al. - bioRxiv (Cold Spring Harbor Laboratory), 2020
Cited by 281 OpenAlex

Ensemble Docking in Drug Discovery PDF

Rommie E. Amaro, Jérôme Baudry, John D. Chodera, Özlem Demir, J. Andrew McCammon et al. - Biophysical Journal, 2018
Cited by 483 OpenAlex

POVME 3.0: Software for Mapping Binding Pocket Flexibility

Jeffrey Wagner, Jesper Givskov Sørensen, Nathan K. Hensley, Celia W. Wong, Clare Zhu et al. - Journal of Chemical Theory and Computation, 2017
Cited by 267 OpenAlex

D3R Grand Challenge 2: blind prediction of protein–ligand poses, affinity rankings, and relative binding free energies PDF

Zied Gaieb, Shuai Liu, Symon Gathiaka, Michael Chiu, Huanwang Yang et al. - Journal of Computer-Aided Molecular Design, 2017
Cited by 197 OpenAlex

Structural basis for targeted DNA cytosine deamination and mutagenesis by APOBEC3A and APOBEC3B

Ke Shi, Michael Carpenter, Surajit Banerjee, Nadine M. Shaban, Kayo Kurahashi et al. - Nature Structural & Molecular Biology, 2016
Cited by 266 OpenAlex

Emerging Computational Methods for the Rational Discovery of Allosteric Drugs

Jeffrey Wagner, Christopher T. Lee, Jacob D. Durrant, Robert D. Malmstrom, Victoria A. Feher et al. - Chemical Reviews, 2016
Cited by 235 OpenAlex

Research Topics

Protein Structure and Dynamics (132) Computational Drug Discovery Methods (97) SARS-CoV-2 and COVID-19 Research (53) Influenza Virus Research Studies (44) Monoclonal and Polyclonal Antibodies Research (37)

Frequent Co-Authors

LO
Lorenzo Casalino
4 joint publications
JA
Jason S. McLellan
4 joint publications
ÖZ
Özlem Demir
3 joint publications
J.
J. Andrew McCammon
3 joint publications
VI
Victoria A. Feher
3 joint publications
ZI
Zied Gaieb
2 joint publications

Affiliations

University of Hawaiʻi at Mānoa
US 2009 - 2009
U.S. National Science Foundation
US 2009 - 2009
Howard Hughes Medical Institute
US 2009 - 2009
University of Illinois Urbana-Champaign
US 2007 - 2001
University of San Diego
US 2025 - 2018

External Profiles

OpenAlex Profile Search Semantic Scholar ORCID Profile Google Scholar

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