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IK

Ivan V. Kulakovskiy

Kazan Federal University RU

ORCID iD 0000-0002-6554-8128
185
Publications
9,731
Citations
36
H-Index
69
i10-Index
6.88
2yr Mean Cite
-
Cite/Paper
Data combined from OpenAlex . OA = OpenAlex S2 = Semantic Scholar
Verify on Google Scholar

Publication & Citation Trends

Most Cited Works

HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis OA
Ivan V. Kulakovskiy, Ilya E. Vorontsov, Ivan Yevshin, Ruslan Sharipov, Alla D. Fedorova +7 more
Nucleic Acids Research 2017
1,051
EpiFactors: a comprehensive database of human epigenetic factors and complexes OA
Yulia A. Medvedeva, Andreas Lennartsson, Rezvan Ehsani, Ivan V. Kulakovskiy, Ilya E. Vorontsov +4 more
Database 2015
314
GTRD: an integrated view of transcription regulation OA
Semyon Kolmykov, Ivan Yevshin, Mikhail A. Kulyashov, Ruslan Sharipov, Yury V. Kondrakhin +4 more
Nucleic Acids Research 2020
292
Effects of cytosine methylation on transcription factor binding sites OA
Yulia A. Medvedeva, Abdullah M. Khamis, Ivan V. Kulakovskiy, Wail Ba-Alawi, Md. Shariful Islam Bhuyan +5 more
BMC Genomics 2014
256
HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models OA
Ivan V. Kulakovskiy, Ilya E. Vorontsov, Ivan Yevshin, Anastasiia V. Soboleva, Artem S. Kasianov +6 more
Nucleic Acids Research 2015
252

Publications

182 total

HOCOMOCO in 2024: a rebuild of the curated collection of binding models for human and mouse transcription factors PDF

Ilya E. Vorontsov, Irina A. Eliseeva, Arsenii Zinkevich, Mikhail Nikonov, Sergey Abramov et al. - Nucleic Acids Research, 2023
Cited by 133 OpenAlex

Landscape of allele-specific transcription factor binding in the human genome PDF

Sergey Abramov, Alexandr Boytsov, Daria Bykova, Dmitry Penzar, Ivan Yevshin et al. - Nature Communications, 2021
Cited by 194 OpenAlex

GTRD: an integrated view of transcription regulation PDF

Semyon Kolmykov, Ivan Yevshin, Mikhail A. Kulyashov, Ruslan Sharipov, Yury V. Kondrakhin et al. - Nucleic Acids Research, 2020
Cited by 292 OpenAlex

Functional annotation of human long noncoding RNAs via molecular phenotyping PDF

Jordan A. Ramilowski, Chi Wai Yip, Saumya Agrawal, Jen-Chien Chang, Yari Ciani et al. - Genome Research, 2020
Cited by 195 OpenAlex

Multifaceted deregulation of gene expression and protein synthesis with age PDF

Aleksandra S. Anisimova, Mark Meerson, Maxim V. Gerashchenko, Ivan V. Kulakovskiy, Sergey E. Dmitriev et al. - Proceedings of the National Academy of Sciences, 2020
Cited by 133 OpenAlex

HOCOMOCO: towards a complete collection of transcription factor binding models for human and mouse via large-scale ChIP-Seq analysis PDF

Ivan V. Kulakovskiy, Ilya E. Vorontsov, Ivan Yevshin, Ruslan Sharipov, Alla D. Fedorova et al. - Nucleic Acids Research, 2017
Cited by 1,051 OpenAlex

Architectural proteins Pita, Zw5,and ZIPIC contain homodimerization domain and support specific long-range interactions in<i>Drosophila</i> PDF

Nikolay Zolotarev, Anna Fedotova, Olga Kyrchanova, Artem Bonchuk, Aleksey A. Penin et al. - Nucleic Acids Research, 2016
Cited by 89 OpenAlex

EpiFactors: a comprehensive database of human epigenetic factors and complexes PDF

Yulia A. Medvedeva, Andreas Lennartsson, Rezvan Ehsani, Ivan V. Kulakovskiy, Ilya E. Vorontsov et al. - Database, 2015
Cited by 314 OpenAlex

HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models PDF

Ivan V. Kulakovskiy, Ilya E. Vorontsov, Ivan Yevshin, Anastasiia V. Soboleva, Artem S. Kasianov et al. - Nucleic Acids Research, 2015
Cited by 252 OpenAlex

Effects of cytosine methylation on transcription factor binding sites PDF

Yulia A. Medvedeva, Abdullah M. Khamis, Ivan V. Kulakovskiy, Wail Ba-Alawi, Md. Shariful Islam Bhuyan et al. - BMC Genomics, 2014
Cited by 256 OpenAlex

Research Topics

Genomics and Chromatin Dynamics (65) RNA and protein synthesis mechanisms (55) RNA Research and Splicing (44) RNA modifications and cancer (30) Cancer Genomics and Diagnostics (16)

Frequent Co-Authors

VS
Vsevolod J. Makeev
10 joint publications
YU
Yulia A. Medvedeva
9 joint publications
IL
Ilya E. Vorontsov
8 joint publications
IV
Ivan Yevshin
5 joint publications
FE
Fedor Kolpakov
5 joint publications
AL
Alexander V. Favorov
5 joint publications

Affiliations

Engelhardt Institute of Molecular Biology
RU 2022 - 2009
Skolkovo Institute of Science and Technology
RU 2022 - 2017
Russian Academy of Sciences
RU 2024 - 2009
Inserm
FR 2010 - 2010
Lomonosov Moscow State University
RU 2022 - 2019

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