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Tarcisio Mendes de Farias

SIB Swiss Institute of Bioinformatics CH

ORCID iD 0000-0002-3175-5372
77
Publications
1,644
Citations
18
H-Index
28
i10-Index
4.27
2yr Mean Cite
-
Cite/Paper
Data combined from OpenAlex + Semantic Scholar. OA = OpenAlex S2 = Semantic Scholar
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Publication & Citation Trends

Publications

77 total

Federated SPARQL query performance evaluation for exploring disease model mouse: combining gene expression, orthology, and disease knowledge graphs

Tatsuya Kushida, Tarcisio Mendes de Farias, A. Sima, Christophe Dessimoz, Hirokazu Chiba - BMC Medical Informatics and Decision Making, 2025
Cited by 2 Semantic Scholar

Web of venom: exploration of big data resources in animal toxin research OA

G. Zancolli, B. V. von Reumont, Gregor Anderluh, F. Çalışkan, M. Chiusano - GigaScience, 2024
Cited by 5 Semantic Scholar

Exploring Disease Model Mouse Using Knowledge Graphs: Combining Gene Expression, Orthology, and Disease Datasets OA

Tatsuya Kushida, Tarcisio Mendes de Farias, A. Sima, Christophe Dessimoz, Hirokazu Chiba - bioRxiv, 2023
Cited by 3 Semantic Scholar

Querying knowledge graphs in natural language PDF

Shiqi Liang, Kurt Stockinger, Tarcisio Mendes de Farias, Maria Anisimova, M. Gil - Journal Of Big Data, 2021
Cited by 66 OpenAlex

Ten Years of Collaborative Progress in the Quest for Orthologs PDF

Benjamin Linard, Ingo Ebersberger, Shawn E. McGlynn, Natasha Glover, Tomohiro Mochizuki et al. - Molecular Biology and Evolution, 2021
Cited by 56 OpenAlex

OMA orthology in 2021: website overhaul, conserved isoforms, ancestral gene order and more PDF

Adrian Altenhoff, Clément-Marie Train, Kimberly J. Gilbert, Ishita Mediratta, Tarcisio Mendes de Farias et al. - Nucleic Acids Research, 2020
Cited by 245 OpenAlex

The Bgee suite: integrated curated expression atlas and comparative transcriptomics in animals PDF

Frederic Bastian, Julien Roux, Anne Niknejad, Aurélie Comte, Sara Simões Costa et al. - Nucleic Acids Research, 2020
Cited by 196 OpenAlex

Enabling semantic queries across federated bioinformatics databases PDF

Ana Claudia Sima, Tarcisio Mendes de Farias, Erich Zbinden, Maria Anisimova, M. Gil et al. - Database, 2019
Cited by 37 OpenAlex

Semantic Integration and Enrichment of Heterogeneous Biological Databases. OA

A. Sima, Kurt Stockinger, Tarcisio Mendes de Farias, M. Gil - Methods in molecular biology, 2019
Cited by 7 Semantic Scholar

A rule-based methodology to extract building model views PDF

Tarcisio Mendes de Farias, Ana Roxin, Christophe Nicolle - Automation in Construction, 2018
Cited by 38 OpenAlex

Research Topics

Semantic Web and Ontologies (38) Biomedical Text Mining and Ontologies (21) Service-Oriented Architecture and Web Services (12) Bioinformatics and Genomic Networks (9) Genomics and Phylogenetic Studies (8)

Affiliations

University of North Texas
US 2003 - 2001
SIB Swiss Institute of Bioinformatics
CH 2025 - 2017
Centre National de la Recherche Scientifique
FR 2018 - 2017
IBM (United States)
US 2012 - 2012
University of North Texas Health Science Center
US 2003 - 2001

External Profiles

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