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Sina Majidian

Johns Hopkins University US

ORCID iD 0000-0001-5345-6982
54
Publications
432
Citations
11
H-Index
14
i10-Index
6.77
2yr Mean Cite
True
Cite/Paper
Data combined from OpenAlex + Semantic Scholar. OA = OpenAlex S2 = Semantic Scholar
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Publication & Citation Trends

Most Cited Works

OMA orthology in 2024: improved prokaryote coverage, ancestral and extant GO enrichment, a revamped synteny viewer and more in the OMA Ecosystem OA
Adrian Altenhoff, Alex Warwick Vesztrocy, Charles Bernard, Clément-Marie Train, Alina Nicheperovich +7 more
Nucleic Acids Research 2023
87
Inference of phylogenetic trees directly from raw sequencing reads using Read2Tree OA
David Dylus, Adrian Altenhoff, Sina Majidian, Fritz J. Sedlazeck, Christophe Dessimoz
Nature Biotechnology 2023
53
The GIAB genomic stratifications resource for human reference genomes OA
Nathan Dwarshuis, Divya Kalra, Jennifer McDaniel, Philippe Sanio, Pilar Álvarez Jerez +9 more
Nature Communications 2024
46
Genomic variant benchmark: if you cannot measure it, you cannot improve it OA
Sina Majidian, Daniel Paiva Agustinho, Chen-Shan Chin, Fritz J. Sedlazeck, Medhat Mahmoud
Genome biology 2023
33
Quest for Orthologs in the Era of Biodiversity Genomics OA
Felix Langschied, Nicola Bordin, Salvatore Cosentino, Diego Fuentes, Natasha Glover +14 more
Genome Biology and Evolution 2024
19

Publications

52 total

Orthology inference at scale with FastOMA PDF

Sina Majidian, Yannis Nevers, Ali Yazdizadeh Kharrazi, Alex Warwick Vesztrocy, Stefano Pascarelli et al. - Nature Methods, 2025
Cited by 16 OpenAlex

OrthoXML-Tools: A Toolkit for Manipulating OrthoXML Files for Orthology Data

Ali Yazdizadeh Kharrazi, A. Altenhoff, Nikolai Romashchenko, Christophe Dessimoz, Sina Majidian - Journal of Molecular Evolution, 2025
Cited by 3 Semantic Scholar

Reconstructing Evolutionary Histories with Hierarchical Orthologous Groups

Garance Sarton-Lohéac, Nikolai Romashchenko, Clément-Marie Train, Sina Majidian, Natasha M. Glover - Journal of Molecular Evolution, 2025
Cited by 5 Semantic Scholar

Sixth Annual BCM Hackathon on Structural Variation and Pangenomics

Farhang Jaryani, Bishnu Adhikar, Shaghayegh Beheshti, Sarah Fross, J. Kubica - F1000Research, 2025
Cited by 1 Semantic Scholar

EvANI benchmarking workflow for evolutionary distance estimation

Sina Majidian, Stephen Hwang, Mohsen Zakeri, Ben Langmead - bioRxiv, 2025
Cited by 3 Semantic Scholar

Correction: Reconstructing Evolutionary Histories with Hierarchical Orthologous Groups

Garance Sarton-Lohéac, Nikolai Romashchenko, Clément-Marie Train, Sina Majidian, Nathasha Glover - Journal of Molecular Evolution, 2025
Cited by 0 Semantic Scholar

Movi Color: fast and accurate taxonomic classification with the move structure

Steven Tan, Sina Majidian, Ben Langmead, Mohsen Zakeri - ACM International Conference on Bioinformatics, Computational Biology and Biomedicine, 2025
Cited by 0 Semantic Scholar

Movi Color: fast and accurate long-read classification with the move structure

Steven Tan, Sina Majidian, Ben Langmead, Mohsen Zakeri - bioRxiv, 2025
Cited by 0 Semantic Scholar

The GIAB genomic stratifications resource for human reference genomes PDF

Nathan Dwarshuis, Divya Kalra, Jennifer McDaniel, Philippe Sanio, Pilar Álvarez Jerez et al. - Nature Communications, 2024
Cited by 46 OpenAlex

Quest for Orthologs in the Era of Biodiversity Genomics PDF

Felix Langschied, Nicola Bordin, Salvatore Cosentino, Diego Fuentes, Natasha Glover et al. - Genome Biology and Evolution, 2024
Cited by 19 OpenAlex

Research Topics

Genomics and Phylogenetic Studies (24) Gene expression and cancer classification (11) Chromosomal and Genetic Variations (6) Genomics and Rare Diseases (6) RNA and protein synthesis mechanisms (5)

Frequent Co-Authors

FR
Fritz J. Sedlazeck
7 joint publications
CH
Christophe Dessimoz
6 joint publications
NA
Natasha Glover
4 joint publications
AD
Adrian Altenhoff
3 joint publications
YA
Yannis Nevers
3 joint publications
DI
Divya Kalra
3 joint publications

Affiliations

SIB Swiss Institute of Bioinformatics
CH 2025 - 2021
Johns Hopkins University
US 2026 - 2025
Johns Hopkins Medicine
US 2026 - 2025
Johns Hopkins University Applied Physics Laboratory
US 2025 - 2025
University of Baltimore
US 2025 - 2025

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