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JY

Jianyi Yang

Shenyang Pharmaceutical University CN

0000-0003-2912-7737

183

Publications

18,910

Citations

40

H-Index

74

i10-Index

5.72

2yr Mean Cite

-

Cite/Paper

Data combined from OpenAlex . OA = OpenAlex S2 = Semantic Scholar

Verify on Google Scholar

Publication & Citation Trends

Most Cited Works

The I-TASSER Suite: protein structure and function prediction

Jianyi Yang, Renxiang Yan, Ambrish Roy, Dong Xu, Jonathan Poisson +1 more

Nature Methods 2014

5,870

I-TASSER server: new development for protein structure and function predictions OA

Jianyi Yang, Yang Zhang

Nucleic Acids Research 2015

2,631

Improved protein structure prediction using predicted interresidue orientations OA

Jianyi Yang, Ivan Anishchenko, Hahnbeom Park, Zhenling Peng, Sergey Ovchinnikov +1 more

Proceedings of the National Academy of Sciences 2020

1,536

Protein–ligand binding site recognition using complementary binding-specific substructure comparison and sequence profile alignment OA

Jianyi Yang, Ambrish Roy, Yang Zhang

Bioinformatics 2013

1,054

BioLiP: a semi-manually curated database for biologically relevant ligand–protein interactions OA

Jianyi Yang, Ambrish Roy, Yang Zhang

Nucleic Acids Research 2012

802

Publications

184 total

trRosettaRNA: automated prediction of RNA 3D structure with transformer network PDF

Wenkai Wang, Chenjie Feng, Renmin Han, Ziyi Wang, Lisha Ye et al. - Nature Communications, 2023

Cited by 184 OpenAlex

The trRosetta server for fast and accurate protein structure prediction PDF

Zongyang Du, Hong Su, Wenkai Wang, Lisha Ye, Hong Wei et al. - Nature Protocols, 2021

Cited by 692 OpenAlex

Improved protein structure prediction using predicted interresidue orientations PDF

Jianyi Yang, Ivan Anishchenko, Hahnbeom Park, Zhenling Peng, Sergey Ovchinnikov et al. - Proceedings of the National Academy of Sciences, 2020

Cited by 1,536 OpenAlex

PotentialNet for Molecular Property Prediction PDF

Evan N. Feinberg, Debnil Sur, Zhenqin Wu, Brooke E. Husic, Huanghao Mai et al. - ACS Central Science, 2018

Cited by 502 OpenAlex

COACH-D: improved protein–ligand binding sites prediction with refined ligand-binding poses through molecular docking PDF

Qi Wu, Zhenling Peng, Yang Zhang, Jianyi Yang - Nucleic Acids Research, 2018

Cited by 290 OpenAlex

mTM-align: an algorithm for fast and accurate multiple protein structure alignment PDF

Runze Dong, Zhenling Peng, Yang Zhang, Jianyi Yang - Bioinformatics, 2017

Cited by 156 OpenAlex

I-TASSER server: new development for protein structure and function predictions PDF

Jianyi Yang, Yang Zhang - Nucleic Acids Research, 2015

Cited by 2,631 OpenAlex

Protein Structure and Function Prediction Using I‐TASSER PDF

Jianyi Yang, Yang Zhang - Current Protocols in Bioinformatics, 2015

Cited by 568 OpenAlex

GPCR-I-TASSER: A Hybrid Approach to G Protein-Coupled Receptor Structure Modeling and the Application to the Human Genome PDF

Jian Zhang, Jianyi Yang, Richard Jang, Yang Zhang - Structure, 2015

Cited by 175 OpenAlex

GLASS: a comprehensive database for experimentally validated GPCR-ligand associations PDF

Wallace Chan, Hongjiu Zhang, Jianyi Yang, Jeffrey Brender, Junguk Hur et al. - Bioinformatics, 2015

Cited by 146 OpenAlex

Research Topics

Protein Structure and Dynamics (61) Machine Learning in Bioinformatics (43) RNA and protein synthesis mechanisms (36) Enzyme Structure and Function (27) Genomics and Phylogenetic Studies (24)

Frequent Co-Authors

YA

Yang Zhang

11 joint publications

ZH

Zhenling Peng

5 joint publications

AM

Ambrish Roy

4 joint publications

RE

Renxiang Yan

2 joint publications

DO

Dong Xu

2 joint publications

IV

Ivan Anishchenko

2 joint publications

Affiliations

University of California, Riverside

US 2022 - 2019

Shenyang Pharmaceutical University

CN 2025 - 2025

Qingdao University

CN 2021 - 2021

Boston University

US 2024 - 2024

Hunan University of Science and Technology

CN 2008 - 2008

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